This thread is resolved. Here is a description of the problem and solution.
Problem: Page translated with ATE don't show up correctly in secondary language.
Solution: When I installed WPML and created the new languages the theme option did not duplicated it self and thats why the pages didn't looked as they should. when I re-saved the Theme option it became as it should be.
The other issue when I translated the page not all words were accounted in the advanced translation, So I deleted and re-translated it they showed up.
This is the technical support forum for WPML - the multilingual WordPress plugin.